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        found that shifts from an omnivorous to   the effect of a high-protein diet on total   patterns seem to have the greater influ-
        a plant-based diet altered gut microbi-  gut bacteria. Obese men consuming a   ence in determining what type of bacte-
        ota composition in as little as five days.   high-protein, weight-loss diet had a sig-  ria is present.
        When subjects ate an animal-based diet   nificant decrease in total gut bacteria,
        with very little carbohydrate or fiber,   specifically butyrate-producing organ-  Micronutrients and the Microbiome
        gut bacteria shifted to be more similar   isms. Researchers couldn’t determine   The gut microbiome influences the
        to that of other carnivorous mammals,   whether the decrease in gut bacteria was   body’s ability to use and absorb micro-
        while the opposite occurred when sub-  caused by the higher protein intake or by   nutrients from food. The example of this
        jects ate a plant-based diet. Consump-  the lower carbohydrate intake. But upon   connection that’s probably most familiar
        tion of the animal-based diet resulted in   examination of fecal metabolites, those   to RDs is vitamin K. It’s routine to give a
        an increase in bile-tolerant microbes and   on the high-protein diets were shown to   vitamin K injection to newborns at birth
        a decrease in those able to ferment car-  have an increase in certain compounds   to prevent hemorrhage. Infants are born
        bohydrates. The opposite was true when   that indicate a shift to microbial protein   with a low concentration of vitamin K–
        subjects consumed a plant-based diet—  fermentation. The metabolites result-  producing bacteria in the gut and may
        the type of microbes shifted to increase   ing from protein fermentation have been   not have an adequate supply for blood
        carbohydrate fermentation. Based on   correlated with an increase in inflam-  clotting. Over time, gut bacteria are able
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        the results of this study, it’s clear that   mation and risk of colorectal cancer.    to start producing adequate amounts of
        both dietary patterns and diet modifica-  The type of carbohydrate consumed   vitamin K.
        tions can affect the composition of the   seems to have significantly different   But the role of gut bacteria in micro-
        gut microbiome relatively quickly. 12  effects on the gut microbiome. Humans   nutrient status isn’t just limited to vita-
                                          don’t have the enzymes to break down   min K. Bacteria can synthesize vitamin
        Macronutrients and the            and digest many dietary carbohydrates,   B 12, vitamin B 6, pantothenic acid, niacin,
        Microbiome                        so gut bacteria may be beneficial by   biotin, and folate.  These various vita-
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        The gut microbiome doesn’t only change   using the fibers humans can’t digest for   mins are either byproducts of fermenta-
        with a shift from an omnivorous to a   energy. A 2016 study by Sonnenburg and   tion or are excreted by the gut bacteria.
        vegetarian or vegan diet; modification   colleagues evaluated the importance of   The ability to produce these important
        of macronutrient ratios also can   carbohydrates that are easily digested   vitamins may help humans maintain
        influence gut microbes. However, it’s   by microbes by studying germ-free   adequate levels of them.
        challenging to study the impact of a   mice. The mice’s digestive tracts were   The microbiome also affects the
        specific macronutrient in isolation   populated with a human fecal sample,   absorption of certain minerals. For
        because a decrease in one results in an   and the mice were put on a high- or low-
        immediate increase in another.    carbohydrate diet. After seven weeks,
          In general, those who consume a   mice on the low-carbohydrate diet
        high-carbohydrate diet tend to have an   had 60% fewer microbial strains in the
        enterotype, or bacterial classification   gut compared with those fed the high-
        that contains more prevotella, whereas   carbohydrate diet.  Other studies also
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        those who eat a higher-fat or -protein   found that low-carbohydrate diets lead
        diet tend to have more bacteroides. Pre-  to a decrease in certain types of gut
        votella has been linked to improved   bacteria, particularly those that produce
        glucose tolerance but also to increased   butyrate. These findings are significant
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        inflammation.                     for human health because low levels
          The type of fat in the diet also seems   of butyrate-producing bacteria in the
        to influence the type and function of   gut have been linked to an increased
        the gut microbes, but human research   risk of inflammation and poor gut-
        isn’t yet available. A 2015 animal study   barrier function. The opposite also is
        found that mice fed lard had increased   true; a study of obese subjects found
        inflammation markers, exacerbated by   that a low-calorie diet including a fiber
        gut bacteria, whereas those fed fish oil,   supplement increased bacterial diversity
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        which is higher in anti-inflammatory   by 25%.  This research suggests that
        omega-3 fatty acids, showed lower   carbohydrates in the diet encourage the
        inflammation and less metabolic   growth of gut-protective bacteria.
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        dysfunction.  The results of this study   In summary, carbohydrates, particu-
        likely are due to the ability of certain   larly in the form of fermentable fibers,
        gut microbiota to facilitate absorption   seem to be beneficial. Also, the type of
        of lipids by increasing the size and   fat consumed also can trigger an inflam-
        number of lipid droplets, which, in turn,   matory or anti-inflammatory response
        increases inflammation.           within the gut microbiome. Although
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          The impact of protein on gut bacte-  the microbiome can be affected by
        ria is unclear. A 2011 study evaluated   short-term dietary changes, long-term

        44 TODAY’S DIETITIAN • MARCH 2020
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