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2354  Part XIII:  Transfusion Medicine               Chapter 137:  Human Leukocyte and Platelet Antigens             2355




                  The last field defines alleles that differ by sequence polymorphisms in   more often than would be predicted if HLA loci were in equilibrium. At
                  introns or in the 5′ or 3′ untranslated regions that flank the exons and   equilibrium, the frequency of an allele at one locus is independent of the
                  introns. In addition, there are suffixes that are used to describe expres-  frequencies of alleles at linked loci. For example, the gene frequency of
                  sion status. Null alleles (not expressed) are identified by the suffix “N.”   HLA-A1 is 0.145 and that of HLA-B8 is 0.1 in North American whites.
                  Low surface expression is represented by “L.” Secreted molecules not   Given no preferential association between A1 and B8, then the hap-
                  present at the surface are assigned “S.”              lotype frequency would be 0.0145 (0.145 × 0.1). However, population
                                                                        studies demonstrate that the actual frequency of the HLA-A1, B8 hap-
                                                                                    18
                  INHERITANCE OF MAJOR                                  lotype is 0.0726.  The degree of linkage disequilibrium is defined as the
                  HISTOCOMPATIBILITY COMPLEX ANTIGENS                   observed frequency minus its expected frequency, 0.0581 in this exam-
                                                                        ple. Although particular alleles found in linkage disequilibria differ for
                  The genes of the MHC demonstrate more polymorphism than any other   various racial groups, all racial groups display significant disequilibria.
                  genetic system; that is, many alleles exist for each locus. Each individual,   Different races and ethnic groups can vary greatly in the frequency with
                  however, has one allele for each locus per chromosome, and therefore,   which HLA antigens are found. 19
                  encodes two HLA antigens per locus. The identification of each HLA
                  antigen of an individual is called a phenotype. Because HLA genes are   HUMAN LEUKOCYTE ANTIGEN TYPING
                  closely linked, recombination within the MHC is rare (≤1%), and a   Tissue typing for HLA antigens can be performed by various methods
                  complete set of HLA genes usually is inherited from each parent as a   using serologic, cellular, and molecular technologies. The most frequent
                  unit. The genes inherited from each parent are referred to as a haplo-  procedures used in the clinical setting are serologic and molecular.
                  type. Maternal and paternal haplotypes can be identified through fam-  Cellular assays such as the mixed lymphocyte reaction and the primed
                  ily studies. Identification of both haplotypes of an individual provides   lymphocyte test were common prior to the widespread adoption of
                  the genotype. Family studies consist of typing for the HLA-A, HLA-B,   DNA methods. Compared to DNA techniques, cellular methods are
                  HLA-C, HLA-DR, and HLA-DQ antigens to identify haplotypes and to   labor-intensive and require the use of radioisotopes; they are mainly
                  rule out genetic recombination within the MHC. Because HLA genes   used in research laboratories.
                  are inherited together on a single chromosome, four combinations of
                  maternal and paternal haplotypes are possible provided no recombina-  Serology
                  tion occurs (Fig. 137–2).                             The microlymphocytotoxicity complement-dependent cytotoxicity (CDC)
                                                                        test has been a fundamental procedure for defining HLA antigens for
                  Linkage Disequilibrium                                more than 30 years,  although it has been supplanted by molecular typ-
                                                                                      20
                  Because the MHC is so highly polymorphic, the probability that any   ing methods. In this assay, a suspension of lymphocytes is incubated
                  two unrelated individuals are HLA identical is extremely low. However,   with human alloantisera or monoclonal antibody in a microtiter tray.
                                                                                                                          21
                  the system exhibits a phenomenon known as  linkage disequilibrium.   Rabbit serum is added as a source of complement. Cell death is induced
                  That is, HLA alleles are inherited together on the same chromosome   when antibody binds to antigen on the cell surface and the complement
                                                                        cascade activated. Death is visualized microscopically by the uptake
                                                                        of  vital  dye  or  by  immunofluorescence.  Panels  used  to  determine  a
                                                                        patient’s HLA type consist of two to four antisera that recognize the
                            Father                 Mother
                                                                        same specificity, which requires approximately 150 different reagents for
                                                                        class I antigens and 80 to 150 for class II antigens. Antisera are usually
                                                                        obtained from multiparous women, multiply transfused patients, and
                                                                        from patients who have rejected allografts. Monoclonal antibodies are
                              ab                    cd
                                                                        also commercially available for many HLA specificities. Serology for
                                                                        class II (DR and DQ) antigens requires enrichment for B lymphocytes,
                                                                        which can be accomplished with antibody or immunomagnetic bead
                                                                        reagents.

                                                                        Molecular Human Leukocyte Antigen Typing
                                                                        The development of the polymerase chain reaction (PCR)  revolu-
                                                                                                                    22
                                                                        tionized the approach to HLA typing. Several DNA-based methods are
                                                                        commonly  accepted for  HLA  typing.  These  include  sequence-based
                                                                        typing,  sequence-specific  primer  (SSP) amplification   and sequence-
                                                                                                               23
                  Child #1    #2          #3        #4           #5     specific oligonucleotide (SSO) probe hybridization. All of these meth-
                    ac        ac          ad        bc           bd     ods involve amplification of genomic DNA from selected portions of
                                                                        HLA genes with oligonucleotide primer pairs. Generally exons 2 and
                        Code:   Haplotype:                              3 of class I and exon 2 of class II genes are amplified. These exons encode
                         a      A1,   B8,  Cw1,  DR17,  DR52,  DQ2      most of the polymorphisms of the classes I and II molecules. Molecular
                         b      A2,   B44,  Cw2,  DR11,  DR52,  DQ7     HLA typing is primarily of clinical interest in marrow/blood stem cell
                         c      A3,   B7,  Cw3,  DR15,  DR51,  DQ6      transplantation.
                         d      A11,  B55,  Cw3,  DR4,  DR53,  DQ8          The advent of “next-generation sequencing” (NGS) strategies
                                                                        has proven useful to high-throughput sequencing of HLA genes. NGS
                  Figure 137–2.  Pedigree  representing  inheritance  of  HLA  antigens.   methods also overcome limitations of Sanger-based methods, includ-
                  Each of the four parental haplotypes is coded by a letter: a and b rep-  ing combination ambiguities that result from heterozygous samples
                  resent paternal haplotypes; c and d represent maternal haplotypes. Each
                  child inherits one paternal and one maternal haplotype such that four   in diploid genomes or between alleles where sequence varies outside
                  combinations are possible.                            the target region (i.e., exons 2 and 3). NGS methods are described as






          Kaushansky_chapter 137_p2353-2364.indd   2355                                                                 9/21/15   3:49 PM
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