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98    Part II  Cellular Basis of Hematology


        cell  sorting  (FACS)-purified  population  of  human  CB   CAFC  content  correlates  well  with  colony-forming  unit-spleen
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        CD34 CD38 CD45RA Thy-1  cells that were additionally purified   (CFU-S) content on day 12 and marrow repopulating capacity. 78,105
        based on surface expression of the integrin α6 (CD49f) yielded 6.7-  However, similarly to the LTC-IC, the CAFC assay does not measure
        fold increased human donor chimerism at 20 weeks in NOD/SCID   LT-HSCs. An advantage of the CAFC and LTC-IC assays is that the
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        IL2Rγ   (NSG)  mice  compared  with  injection  with  the  identical   estimate of stem/progenitor cell content is not confounded by the
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        dose  of  CD34 CD38 CD45RA Thy-1 CD49f   cells.   Only  the   homing  capacity  of  the  cell  population  being  tested.  However,
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        Thy-1 CD49f  cells could be serially transplanted in this study, and   competitive  transplantation  assays  provide  a  more  physiologically
        the enrichment for LT-HSCs via limiting dilution analysis was esti-  relevant measure of functional HSC content and allow quantification
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        mated to be approximately one in 11 CD34 CD38 CD45RA Thy-  of LT-HSC content as well as homing efficiency. 64,78,107
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        1 CD49f   cells.   Further  purification  of  this  population  of  cells
        using  Rh123  dye  demonstrated  that  single-cell  transplantation  of
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        Thy-1 Rh123 CD49f  cells yielded long-term, multilineage engraft-  In Vivo Assays
        ment in five of 18 transplanted recipients. Serial transplantation was
        also successful in two of four secondary mice, suggesting that at least   Colony-Forming Unit–Spleen Assay
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        some of the Thy-1 Rh123 CD49f  cells undergo self-renewal.  Of   The first reproducible in vivo assay for hematopoietic progenitor cells
        note, because mice were transplanted via intrafemoral injection in   (HPCs)  was  the  CFU-S  assay,  which  was  developed  by  Till  and
        these studies, it remained unknown whether this panel of markers   McCullough. 12,88   In  this  assay,  BM  cells  are  injected  into  lethally
        equally identified human HSCs capable of homing properly to the   irradiated mice, and macroscopic spleen colonies are measured from
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        BM after intravenous injection. Nonetheless, these studies revealed   one to three weeks after injection.  These colonies represent short-
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        that the addition of CD49f  to the panel of human LT-HSC markers   term repopulating cell and MPP activity but do not measure LT-HSC
        provided an improved capability to isolate human HSCs at a level of   content. 4,78
        purity that was comparable to that applied to murine HSC isolation.
           Recently,  two  novel  cell  surface  markers  for  human  HSCs   Competitive Repopulation Assay
        were  identified,  CD166  (activated  leukocyte  adhesion  molecule)   A significant advance in the study of hematopoiesis was the develop-
        and  protein  tyrosine  phosphatase-sigma  (PTPσ). 101,102   Human   ment of the competitive repopulating assay (Fig. 9.3). 78,108  In this assay,
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        Lin CD34 CD38 CD49f CD166   cells  engrafted  in  primary   an  unknown  population  of  hematopoietic  cells  is  transplanted  via
        and  secondary  NSG  mice  at  a  significantly  higher  level  than   intravenous  injection  into  lethally  irradiated  syngeneic  mice  along
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        Lin CD34 CD38 CD49f CD166  cells.  Interestingly, CD166 is   with a competing dose of host-derived BM cells. 78,109,110  This assay has
        also expressed by BM osteoblasts and it was postulated that CD166   been refined over time such that it is typically performed using a limit-
        mediated  HSC  maintenance  in  vivo  via  hemophilic  interactions   ing dilution method in which several cell doses (typically more than
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        between CD166 expressed on HSCs and osteoblasts.  Quarmyne   three to five doses; n = 10 mice/dose level) of BM cells or purified
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        et al  reported  that  NSG  mice  transplanted  with  human  CB   HSCs (e.g., CD34 KSL cells) are injected into lethally irradiated mice
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        Lin CD34 CD38 CD45RA PTPσ   cells  displayed  15-fold  higher   along with a fixed dose of host competitor BM cells, such that a fraction
        human  hematopoietic  cell  engraftment  at  16  weeks  compared   of the recipient mice can be predicted to have nonengraftment. 78,111,112
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        to  mice  transplanted  with  Lin CD34 CD38 CD45RA   cells  or   This approach allows the application of Poisson statistical analysis to
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        Lin CD34 CD38 CD45RA PTPσ   cells.   PTPσ  was  shown  to   provide an estimate of competitive repopulating units (CRUs) within
        negatively regulate both murine and human HSC repopulation fol-  the donor hematopoietic cell population. 78,111–113  An important feature
        lowing transplantation, via inhibition of the RhoGTPase, RAC1. 102  of the CRU assay is the potential to estimate the frequency of LT-HSCs
                                                              in a given hematopoietic cell population. Donor cell engraftment that
        Functional Characterization                           is detected within the first 8 to 12 weeks after transplantation, reflects
                                                              the contribution of ST-HSCs, which extinguish at or beyond 12 weeks
                                                              posttransplant. Therefore, the number of LT-HSCs cannot be con-
        In Vitro Assays                                       vincingly estimated until more than 12–20 weeks posttransplanta-
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                                                              tion. 78,114  Dykstra et al  showed that competitive transplantation of
        The  colony-forming  cell  (CFC)  assay  does  not  measure  HSC   single, phenotypic HSCs results in stable donor cell engraftment in
        content  but  rather  committed  myeloid  progenitor  cell  content  via   lethally irradiated mice beyond 16 weeks, and retroviral marking of
        a  14-day  assay  for  colonies  within  methylcellulose  media  that  is   HSCs  revealed  that  stable  donor-derived  hematopoiesis  was  not
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        supplemented with specific growth factors.  The CFC assay measures   observed in recipient mice until six months posttransplant. 114
        colony-forming  unit-granulocyte/macrophage  (CFU-GM),  burst-  A commonly used and rigorous approach to estimate the presence
        forming  unit-erythroid  (BFU-E)  and  CFU-granulocyte/erythroid/  of LT-HSCs is the performance of secondary, tertiary, and quaternary
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        macrophage/megakaryocyte (CFU-GEMM). The CFU-GEMM, or   HSC transplants.  This approach is based on the principle that a
        CFU-mix colonies, represent a more immature progenitor cell popu-  singular  feature  of  primitive  LT-HSCs  is  the  capacity  to  serially
        lation. B- and T-cell progenitor cell content can also be measured via   reconstitute  multilineage  hematopoiesis  in  vivo  without  exhaus-
        in vitro assays but requires specialized coculture conditions, which are   tion. 78,116–118  In this method, whole BM is typically collected from
        described elsewhere. 78,103,104                       primary recipient mice and then injected, along with host competitor
           The long-term culture-initiating cell (LTC-IC) assay is a 6-week   BM cells, into lethally irradiated syngeneic mice. Donor cell repopu-
        in vitro assay in which BM cells are cocultured with murine stromal   lation is then measured at 12–20 weeks posttransplantation. Serial
        cells for four weeks followed by replating of the entire culture system   transplantation assays have the limitation of being potentially con-
        into methylcellulose and additional two-week assay for colony forma-  founded  by  variables  such  as  homing  efficiency  of  the  donor
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        tion. 78,105  The LTC-IC, unlike the CFC, measures a more immature   cells. 78,119,120  Therefore, as pointed out by Purton and Scadden  in
        stem/progenitor cell population, although the results of the LTC-IC   an excellent review of this subject, serial transplantation assays may
        are  inherently  dependent  and  limited  by  technical  variabilities  in   be better suited to studies of wild type hematopoietic cell populations
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        stromal coculture experiments.  Importantly, the LTC-IC popula-  as opposed to mutant mice-derived hematopoietic cells, which may
        tion  lacks  long-term  repopulating  cells  because  transplantation  of   have alterations in homing or engraftment mechanisms independent
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        LTC-ICs into mice in a competitive transplantation assay does not   of HSC content.  Utilization of whole BM avoids issues regarding
        result in any long-term reconstitution. 78,88,89      the fidelity of phenotypic markers of HSCs in mutant mice and is
           The  cobblestone  area-forming  cell  (CAFC)  assay  also  involves   perhaps more broadly feasible than FACS-isolated HSC populations
        coculture of HSCs with preestablished stromal cell monolayers and   at some centers. 78,121–124  However, the use of purified HSCs avoids
        relies  on  microscopic  quantification  of  cobblestone-forming  cells   the potential confounding effects of accessory cells contained within
        embedded underneath the stromal layer. 105,106  It has been shown that   the  BM  graft  on  donor  cell  repopulation  and  allows  for  precise
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