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                 Classification of Medically


                 Important Bacteria


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                   CHAPTER  C ONTENT S

                   Principles of Classification
                   Pearls





                    PRINCIPLES OF CLASSIFICATION
                                                                     genus when DNA sequencing of their genome reveals they
                    The current classification of bacteria is based primarily on
                                                                     are significantly different and should be classified in a new
                    morphologic and biochemical characteristics. A scheme   examples of these criteria placing bacteria into the same
                                                                     or different genus. For example, an organism formerly
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                    that divides the medically important organisms by genus is
                                                                     known as  Pseudomonas cepacia has been reclassified as
                    shown in Table 5–1. For pedagogic purposes, this classifica-
                                                                     Burkholderia cepacia because the base sequence of its DNA
                    tion scheme deviates from those derived from strict taxo-
                    nomic principles in two ways:
                                                                     members of the genus Pseudomonas.
                       (1) Only organisms that are described in this book in
                    the section on medically important bacteria are included.
                       (2) Because there are so many gram-negative rods, they
                                                                        PEARLS
                    are divided into three categories: respiratory organisms,
                    zoonotic organisms, and enteric and related organisms.
                       The initial criterion used in the classification is the
                                                                         such as the nature of the cell wall, staining characteristics,
                    nature of the cell wall (i.e., is it rigid, flexible, or absent?).
                                                                         ability to grow in the presence or absence of oxygen, and
                    Bacteria with rigid, thick walls can be subdivided into free-  •  The  classification  of  bacteria  is  based  on  various  criteria,
                                                                         ability to form spores.
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                    living bacteria, which are capable of growing on laboratory
                                                                        •  The  criterion  currently  used  is  the  base  sequence  of  the
                    medium in the absence of human or other animal cells, and
                                                                         genome  DNA.  Several  bacteria  have  been  reclassified  on
                    non–free-living  bacteria,  which  are  obligate  intracellular
                                                                         the basis of this information.
                    parasites and therefore can grow only within human or
                    other  animal  cells.  The  free-living  organisms  are  further
                    subdivided according to shape and staining reaction into a
                    variety of gram-positive and gram-negative cocci and rods
                    with different oxygen requirements and spore-forming
                                                                     COURSE EXAMINATIONS
                    abilities. Bacteria with flexible, thin walls (the spirochetes)
                    and those without cell walls (the mycoplasmas) form sepa-
                    rate units.
                                                                     found in the Basic Bacteriology section of Part XIII:
                                                                     USMLE (National Board) Practice Questions starting on
                       Using these criteria, along with various biochemical
                    reactions, many bacteria can be readily classified into sepa-  Questions on the topics discussed in this chapter can be
                                                                     page 709. Also see Part XIV: USMLE (National Board)
                                                                     Practice Examination starting on page 751.
                    rate genus and species. However, there have been several
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