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                                       P P P Physiologic and Pathologic Responses
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                   CHAPTER
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                                            G G G Genetics
                                            Bradley E. Aouizerat
                   Nearlyy 6 decades ago, Watson and c lollleagues discovered the secret
                                                                       (G)), deoxyadenine (A), deeoxxythymine (T), and deoxycytosine
                   Ne ar     d   go  Wa ts on  a nd  c  g       c re t  (G  d  xy  in  A ),  d  o    (T ),  nd   y to si ne
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                   of life when they published the chemical structure of DNA. The  (C), are placed in a unique order to encode for all of the heritable
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                   do double heliic lal structure m dade immediatelyy obvious howw this moo-  units in all liviing organisms (Fig. 4-1).
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                   le lecularr archivee of life could encode information in the copious s  DNNA is the chemical responsible for preserving, copying, and
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                   quantities necessary to program a living cell. This discovery set  transmitting information withinn cells. DNA, located in the nu-
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                   i into motiion a reevolution thatt hass continuedd to unf loldd tto this dday,  l cleus  f every celll, harbors the instructions that provide almost all
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                   much of it guided by this original discovery.       of the information necessary for a living organism to grow and
                     Research is a slow process, often with years between each sen-  function. The DNA molecule resembles a twisted ladder, usually
                   sation, and even today, the DNA revolution remains largely be-  described as a double helix. The rungs are repeating units called
                   hind laboratory doors, in the form of scientists’ ever-increasing  nucleotides, which are the quantum building blocks of DNA. Nu-
                   understanding of the mechanisms of life. But a few powerful in-  cleotides are composed of one sugar-phosphate molecule (the linear
                   ventions—forensic DNA examination, DNA-based drug discov-  strands or outer rails of the DNA ladder) and one base (Fig. 4-2).
                   ery, and specific disease susceptibility mutation screening—have  DNA in eukaryotic cells consists of two nucleotide strands joined
                   enjoyed a significant active contribution to society (see Display   by weak chemical bonds between the two bases, forming base
                   4-1 for definitions).                                pairs. Therefore, a base pair constitutes a “rung” on the ladder of
                     DNA underlies almost every aspect of human health. Obtain-  the DNA. The four bases organize in two fundamental pairs, A
                   ing a detailed picture of how genes and other DNA sequences  with T and C with G. One rail of a DNA ladder is a single strand
                   function together and interact with environmental factors ulti-  of DNA that is denoted by a sequence of nucleotides (e.g., ACGT-
                   mately will lead to the discovery of pathways involved in normal  GCTGACCTGACGTAGGGCATA), which has complementary
                   processes and in disease pathogenesis. Such knowledge will have  bases on the opposite rail, forming complementary nucleotide
                   a profound impact on the way disorders are diagnosed, treated,  strands (e.g., TATGCCCTACGTCAGGTCAGCACGT). Within
                   and prevented and will bring about revolutionary changes in clin-  the regions of DNA that express information, these strings of nu-
                   ical and public health practice. Some of these transformative de-  cleotides are organized into three unit “words” termed codons.
                   velopments are described herein.                    These codons are organized into groups called exons. Ultimately,
                     How do scientists study and find these genetic mutations? They  these exons form sentences, or genes. Genes encode all of the nec-
                   have available to them a growing battery of tools and technologies  essary information to produce a messenger molecule composed of
                   to compare a DNA sequence isolated from a healthy person to the  ribonucleic acids (RNA), which are composed of four other nu-
                   same region of DNA extracted from an afflicted person. Advanced  cleotides: guanine (G), adenine (A), cytosine (C), and uracil (U).
                   computer technologies, combined with the explosion of genetic  Thus, DNA sentences are transcribed into RNA messages, which
                   data that is currently generated from the various whole-genome se-  are single-stranded complementary copies of DNA. Once
                   quencing projects, enable scientists to use these molecular genetic  processed, these messages leave the nucleus and enter another cel-
                   tools to more accurately diagnose disease and to design new thera-  lular compartment where they are threaded into cellular machin-
                   peutic interventions. This chapter reviews some common princi-  ery, which translates the information into its final state, the protein.
                   ples that geneticists—scientists who study the inheritance pattern  Proteins are required for the structure, function, and regulation of
                   of specific traits—can use to inform clinical practice.  the body’s cells, tissues, and organs. This process, where DNA is
                                                                       transcribed into RNA and subsequently translated into proteins,
                                                                       represents the central dogma of molecular biology. It is worth not-
                      DNA                                              ing that a small subset of genes expresses RNA without being trans-
                                                                       lated into proteins. These other forms of RNA play crucial roles in
                   Molecular genetics is the study of the units, or segments, of DNA  the biology of the cell.
                   that pass information from generation to generation. These mol-  Humans have approximately 3 billion base pairs of DNA in
                   ecules, our genes, are long sequences of deoxyribonucleic acid, or  most of their cells. This complete set of genes is called a genome. The
                   DNA. Just four chemical building blocks or bases, deoxyguanine  exact sequence of the bases is different for everyone, which makes
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