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986    Part VII  Hematologic Malignancies


        SUZ12; as well as kinases such as JAK1, JAK2, JAK3, MPL, KRAS,   there are likely additional factors contributing to the development of
        and NRAS.                                             megakaryoblastic disease. Cooperating mutations, the target cell, and
           t(1;22),  which  is  seen  exclusively  in  infants  with  AMKL,  fuses   the microenvironment all have the potential to direct lineage during
        RBM15 and MKL1. MKL1 is a transcriptional coactivator for serum   the process of transformation.
        response factor (SRF), a transcription factor that regulates the expres-
        sion of genes involved in cell growth, proliferation, and differentia-
        tion,  as  well  as  genes  that  control  the  actin  cytoskeleton.  In   Cytogenetically Normal AML
        unstimulated cells MKL1 associates with G-actin monomers and is
        retained in the cytoplasm. Following stimulation and Rho-mediated   Approximately 20%–25% of pediatric AML cases lack chromosomal
        actin polymerization, G-actin pools are depleted and MKL1 translo-  aberrations  and  are  prognostically  defined  as  intermediate  risk. To
        cates to the nucleus, associating with SRF to activate gene transcrip-  understand the underlying lesions driving this form of AML and to
        tion. RBM15 encodes a protein containing three N-terminal RNA   use  this  information  to  further  refine  risk  stratification  of  these
        recognition motifs that bind to nucleic acids and a Spen paralogue   patients, efforts have been made by a number of groups to identifying
        and  orthologue  C-terminal  (SPOC)  domain  that  is  thought  to   the  genetic  lesions  within  this  AML  subtype.  Identified  genetic
        interact with the SMRT and NCoR corepressor complexes, as well   lesions  have  included  mutations  within  the  genes  FLT3,  NPM1,
        as RBPJ, a transcription factor downstream of Notch signaling. The   IDH,  RAS,  and  CEBPA.  More  recent  whole-genome  sequencing
        fusion  of  MKL1  to  RBM15  deregulates  the  normal  intracellular   analysis  of  cytogenetically  normal  adult  AML  has  identified  these
        localization of MKL1 such that it is becomes constitutively localized   previously described mutations, as well as the mutation of a number
        to the nucleus, resulting in SRF activation even in the absence of   of other genes including DNMT3A, which are thought to contribute
        stimuli. In addition to the SRF transcriptional program, the fusion   to tumorigenesis. Below we discuss the most frequent somatic muta-
        also  aberrantly  activates  RBPJ  transcriptional  targets.  While  both   tions identified within pediatric AMLs with a normal karyotype.
        transcription  programs  have  been  shown  to  be  deregulated  by  the
        fusion gene, the degree to which they contribute to transformation   Nucleophosmin
        is still unclear.                                     Nucleophosmin (NPM) is often mutated in cytogenetically normal
           Until recently, with the exception of the RBM15-MKL1 fusion,   AML and is unique in that it has both oncogenic and tumor sup-
        the genetic etiology of non-DS-AMKL had remained elusive. Tran-  pressor  functions.  The  protein  shuttles  between  the  nucleus  and
        scriptome sequencing of a small cohort identified a cryptic inversion   cytoplasm, taking part in many cellular processes including regulation
        on chromosome 16 [inv(16)(p13.3q24.3)] in half of the patients that   of  ribosomal  RNA  transcription/processing,  transport  of  preribo-
        resulted in the joining of CBFA2T3, a member of the ETO family   somal  particles  to  the  cytoplasm,  DNA-histone  and  nucleosome
        of nuclear corepressors, to GLIS2, a member of the GLI family of   assembly,  as  well  as  regulating  the  activity  and  stability  of  tumor
        transcription factors. The gene expression profile of CBFA2T3-GLIS2   suppressors  such  as  p53  and  ARF.  Alterations  of  NPM  in  cancer
        AMKL was distinct from that of AMKL cells lacking this chimeric   include its overexpression in a variety of epithelial cancers; involve-
        transcript, and from other genetic subtypes of pediatric AML. Fur-  ment in chromosomal translocation in several hematological malig-
        thermore, the CBFA2T3-GLIS2 fusion gene conferred a poor prog-  nancies  including  the  t(2;5)[NPM-ALK]  in  anaplastic  large-cell
        nosis,  a  finding  that  has  since  been  confirmed.  Expression  of   lymphoma  (ALCL),  t(3;5)[NPM-MLF1]  in  myelodysplastic  syn-
        CBFA2T3-GLIS2  in  Drosophila  and  murine  hematopoietic  cells   drome  and  AML  and  t(5;17)[NPM-RARA]  in  variant  APL;  and
        induces bone morphogenic protein (BMP) signaling, a pathway not   point mutations that alter its C-terminus resulting in the creation of
        previously implicated in AML, and results in a marked increase in   a new nuclear export signal. Each of these genetic alterations result
        the  self-renewal  capacity  of  hematopoietic  progenitors.  CBFA2T3-  in alteration of the normal shuttling of NPM between the cytoplasm
        GLIS2-expressing  cells  remained  growth  factor  dependent  in  vitro   and nucleus, resulting in constitutive cytoplasmic localization. Muta-
        and fail to induce leukemia in mice, consistent with a requirement   tions  in  NPM  are  found  in  35%  of  cytogenetically  normal  adult
        for cooperative mutations. Overall, the total burden of somatic muta-  AMLs but only between 2% and 12% of pediatric AMLs with normal
        tions in CBFA2T3-GLIS2-expressing  cases is low; however,  several   cytogenetics.
        have been found to carry lesions in either a Janus kinase(JAK) gene   The tumor suppressor function of NPM in hematologic malig-
        and/or a somatic amplification of the Down syndrome critical region   nancies is attributed to its role in maintenance of genomic stability
        on chromosome 21.                                     and  in  the  regulation  of  the  ARF-p53  tumor  suppressor  pathway.
           In addition to CBFA2T3-GLIS2, approximately 8% of pediatric   Wild-type  NPM  forms  a  complex  with  ARF  and  HDM2,  which
        non–DS-AMKL  cases  carry  the  NUP98-KDM5A  fusion.  NUP98,   stabilizes  ARF  and  prevents  HDM2-mediated  p53  degradation.
        a nucleoporin family member with transactivation activity, fused to   More recently, it has also been shown that in the absence of NPM or
        KDM5A, an H3K4me3-binding PHD finger, was initially described   in the presence of an NPM mutant, cells express increased protein
        in  adult  AML.  When  introduced  into  murine  bone  marrow,  this   levels of the MYC proto-oncogene due to a loss of degradation by
        fusion oncogene induces a myeloid differentiation arrest and mice   the NPM-stabilized ubiquitin ligase, FBW7G. Given that mutations
        develop AML with an average latency of 69 days. Wang and colleagues   in NPM are able to suppress the ARF-p53 tumor suppressor pathway
        demonstrated this fusion to be bound to H3K4me3 mononucleo-  and enhance the oncogenic MYC pathway, it is perhaps not surpris-
        somes, showing the PHD finger plays a role in targeting the fusion   ing that the mutation occurs in the context of cytogenetically normal
        to  the  genome.  Interestingly,  microarray  analysis  identified  several   AML with a minimal number of secondary lesions.
        polycomb proteins carrying H3K4me3 marks to be transcriptionally
        upregulated in response to the fusion, while housekeeping genes with   Isocitrate Dehydrogenase and TET2
        constitutive H3K4me3 marks remained unchanged. Affected poly-  Isocitrate dehydrogenase 1 (IDH1) was initially identified as a target
        comb targets confirmed by chromatin immunoprecipitation include   of  cancer-associated  mutations  in  a  study  that  performed  whole-
        genes  upregulated  in  MLL-rearranged  leukemia  such  as  HOXA5,   exome sequencing on glioblastoma multiforme (GBM). Subsequent
        HOXA7, HOXA9, HOXA10, MEIS1, and PBX1. Furthermore, the   analyses revealed IDH1 or IDH2 mutations in up to 16% of adult
        authors  demonstrate  a  block  in  PRC2  binding,  the  complex  that   and  about  7%  of  pediatric  AMLs  with  normal  cytogenetics. The
        antagonizes  polycomb  proteins  through  transcriptional  repression   mutations  in  both  GBM  and  AML  have  been  heterozygous  and
        of  target  genes.  Therefore,  the  NUP98-KDM5A  fusion  is  able  to   restricted to arginine 132 in exon 4 of IDH1, or to either the homolo-
        prevent silencing of critical transcription factors that play a role in   gous residue in IDH2, R172, or to a second arginine, R140, also
        maintaining hematopoietic progenitor status, similar to MLL gene   located in its substrate binding pocket. Although the distribution of
        rearrangements.  It  is  perhaps  not  surprising  then,  that  MLL-AF9   specific IDH1/IDH2 mutations varies between GBM and AML, each
        and MLL-AF10 fusion events have also been detected in non-DS-  results in a loss of the enzyme’s ability to catalyze the oxidative car-
        AMKL. As these lesions are also found in other subtypes of AML,   boxylation of isocitrate to α-ketoglutarate (α-KG), coupled with a
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