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964          Part seven  Organ-Specific Inflammatory Disease


        microbiome analyses are based on DNA extraction and poly-  on a limited scale and at considerable cost to individuals with
        merase chain reaction (PCR) amplification of regions of the 16S   T1DA and life-threatening complications, in particular lack of
        ribosomal RNA (rRNA) gene that are conserved among bacteria.   awareness of hypoglycemia that is unresponsive to conventional
        Although other internal regions of the 16S gene are variable   treatment. However, shortage of donor tissue, cost, and the need
        and enable taxonomic classification from the phylum to genus   for life-long immune suppressive agents militate against this
        level, 16S sequencing does not have the sensitivity to distinguish   solution. Longer-term, genetically engineered pig islet xenografts
        individual species and their strains. Direct metagenomic sequenc-  may overcome the tissue supply barrier. Stem cells, in particular
        ing of all species, as well as analysis of their transcriptomes,   autologous induced pluripotent stem cells (iPSCs), remain the
        epigenomes, and functions, is required to fully comprehend the   great hope, but early proof-of-concept results in rodents await
        role of the microbiome in T1DA and other chronic immune–  scale-up and translation to humans.
        inflammatory diseases. The marked difference in the incidence   The incidence of spontaneous autoimmune diabetes in
        of T1DA between Finland and neighboring Karelia was found   inbred NOD mice is decreased by many immune and other
        to be associated in Finnish children having decreased bacterial   (including environmental) interventions introduced early in the
        diversity overall, a dominance of the phylum Bacteroidetes, and   disease course, although various interventions are often only
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        lack of butyrate-producing bacteria.  These changes were seen   effective in a proportion of mice, sometimes only delay disease
        after the appearance of autoantibodies, suggesting that they   onset, and sometimes have no effect (and are therefore not
        followed, rather than preceded, the disease process. However,   reported). Nevertheless, these findings in the NOD mouse suggest
        in a further small study in Finnish children, metagenomic   that T1DA is potentially preventable in outbred humans. On
        sequencing identified a relative abundance of Bacteroides dorei,   the basis of the key role of proinsulin in driving β-cell autoim-
        which peaked around 7–8 months of age with the introduction of   munity, the NOD mouse has provided “proof-of-concept” for the
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        solids and preceded the appearance of islet autoantibodies. Gut   efficacy of antigen-specific vaccination strategies.  In humans,
        Bacteroides species are abundant in Finnish children, including   it has been convenient to classify prevention into primary
        B. dorei, which produces a lipopolysaccharide (LPS) endotoxin   (before the onset of islet autoimmunity), secondary (after
        that inhibits the immunostimulatory activity of Escherichia coli   the onset of islet autoimmunity), and tertiary (after the onset
        LPS, known to protect against development of diabetes in NOD   of clinical disease) prevention. Of course, real prevention is
        mice. These findings suggest that an approach to lowering the   primary prevention—identifying those at genetic risk and inter-
        environmental contribution to T1DA will be intervention with   vening to avert islet autoimmunity. Neonatal screening based
        prebiotics, probiotics, or other means to favorably alter the   on HLA genotyping to identify at-risk individuals would be
        composition of the gut microbiome.                     a  basis  for  primary  prevention, but  even  in  countries  with  a
                                                               high incidence of T1DA, this would have only modest predictive
            KeY COnCePts                                       value, and intervention could be justified if it was practical and
         Type 1A Diabetes: Epidemiology, Environment,          safe, if not efficacious. The mandate Primum non nocere (“first
                                                               do no harm”) dictates that many immune modulating agents
         and Genes                                             are off limits for either primary or secondary prevention in
          •  Incidence is increasing as a result of the impact of environment.  T1DA. Options (e.g., to modification of the diet or microbi-
          •  Environment factors enable increasing penetrance of lower-risk human   ome or of forms of vaccination) are greatly restricted. Agents
           leukocyte antigen (HLA) alleles.                    that are effective in other autoimmune diseases are more
          •  Environmental factors are multifactorial but generally “pro-inflammatory”   likely to be effective in the early asymptomatic stage of T1DA,
           and impact via microbiome dysbiosis and epigenetic modifications on   not after clinical presentation when most  β cells have been
           polygene expression to cause immune dysregulation in early life.  destroyed. Indeed, clinical trials of tertiary prevention with
                                                               more than 70 different agents since the early 1980s have failed
        TREATMENT AND PREVENTION                               to unequivocally demonstrate sustained preservation of residual
                                                               β-cell function. 36,37  Interestingly, the number of trials reporting a
        Treatment of the metabolic syndrome of T1D is focused on   positive outcome decreased from the 1980s, together with a shift
        optimizing blood glucose control with various modes of insulin   in the primary outcome measure away from clinical remission
        delivery to prevent the short- and long-term complications of   to the more rigorous measure of residual insulin (stimulated
        hyperglycemia. Refinements and advances over the past 30 years   C-peptide) secretion.
        in insulin delivery and improved control of blood glucose and   Is there a potential solution to the “off limits” dilemma? Classi-
        blood pressure have greatly improved the lives and prognosis of   cally, T1DA is regarded as a metabolic disorder diagnosed at clinical
        individuals with T1DA. Nevertheless, despite the introduction   presentation with symptoms and signs of hyperglycemia. However,
        of pure, recombinant forms of human insulin, which have varied   based on pathology, T1DA is an immune disease—autoimmune
        kinetics of action and can be injected via a syringe or continuously   β-cell disorder (ABCD)—and only becomes a metabolic disorder
        infused via a pump, and blood glucose self-monitoring, which   at the end stage of its pathology. Accepting this reality would
        can now be done continuously in real time, those with T1DA   amount to a paradigm shift that could profoundly change the
        have not been rescued from a life sentence, and their blood   approach to and outcome of secondary prevention. Consider the
        glucose control remains less than physiological. The “cure” of   situation in other autoimmune diseases. In rheumatoid arthritis,
        T1DA requires the transplantation of insulin-secreting cells or   the pathology and clinical features (painful swollen joints) appear
        their progenitors or the regeneration of β cells in situ, in conjunc-  concomitantly when effective disease-sparing treatment with
        tion with approaches to prevent allograft rejection and/or   newer biological agents is initiated, not at the end stage of pathol-
        recurrence of autoimmunity (there will be no cure for T1DA   ogy when the joints are irreversibly deformed. A further benefit
        without prevention). Currently, in some economically developed   of diagnosing of T1DA early in the asymptomatic stage, based
        societies, allografts of whole pancreas or isolated islets are offered   on evidence of underlying pathology, is that it would markedly
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